Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 MRPS18AP1-201ENST00000414458 589 ntBASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 AC107373.2-201ENST00000607735 490 ntBASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 GPALPP1-207ENST00000611650 899 ntBASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC83Q8IWF9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC83Q8IWF9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC83Q8IWF9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC83Q8IWF9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC83Q8IWF9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 HLA-K-203ENST00000430151 1046 ntBASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 FAM86LP-201ENST00000478302 853 ntBASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 AC023310.3-201ENST00000557027 670 ntBASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 AC100756.1-201ENST00000562736 682 ntBASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 AC138749.3-201ENST00000567691 622 ntBASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 AC116165.1-201ENST00000611806 668 ntBASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC83Q8IWF9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 AC093525.8-201ENST00000624099 1342 ntBASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 AL137783.1-201ENST00000623494 1896 ntBASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms