Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AP000845.1-201ENST00000581677 2131 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 TSEN15P1-201ENST00000423257 515 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 GHSR-202ENST00000427970 912 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 CNN2P2-201ENST00000443536 909 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 CNN2P3-201ENST00000450201 906 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 HLA-V-204ENST00000476601 1289 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AC125807.1-201ENST00000483097 614 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 TEX28P1-201ENST00000613479 1221 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 TEX28P2-201ENST00000617764 1221 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AL136317.3-201ENST00000618497 906 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 Z92544.3-201ENST00000624747 417 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AC010327.5-201ENST00000586923 3061 ntBASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 DNAJB3-202ENST00000449667 1266 ntBASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AL512361.1-201ENST00000554200 418 ntBASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AL138828.2-201ENST00000615812 383 ntBASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC50Q8IVM0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.14■□□□□ 0.18
CCDC50Q8IVM0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC50Q8IVM0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC50Q8IVM0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC50Q8IVM0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms