Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
USP31Q70CQ4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.92■□□□□ 0.78
USP31Q70CQ4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
USP31Q70CQ4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP31Q70CQ4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 FAM90A2P-201ENST00000511144 1395 ntBASIC19.91■□□□□ 0.78
USP31Q70CQ4 FAM90A25P-201ENST00000528404 1395 ntBASIC19.91■□□□□ 0.78
USP31Q70CQ4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 AC092299.1-201ENST00000632679 757 ntBASIC19.91■□□□□ 0.78
USP31Q70CQ4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 AC008894.3-201ENST00000624324 3103 ntBASIC19.91■□□□□ 0.78
USP31Q70CQ4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 MRPL37P1-201ENST00000592451 1337 ntBASIC19.91■□□□□ 0.78
USP31Q70CQ4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
USP31Q70CQ4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP31Q70CQ4 CAP2P1-201ENST00000557743 1390 ntBASIC19.91■□□□□ 0.78
USP31Q70CQ4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 AC007718.1-201ENST00000621078 280 ntBASIC19.9■□□□□ 0.78
USP31Q70CQ4 AC011491.1-203ENST00000637688 543 ntBASIC19.9■□□□□ 0.78
USP31Q70CQ4 AL805961.1-201ENST00000642026 753 ntBASIC19.9■□□□□ 0.78
USP31Q70CQ4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 HTR7P1-202ENST00000624664 4411 ntBASIC19.9■□□□□ 0.78
USP31Q70CQ4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP31Q70CQ4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP31Q70CQ4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP31Q70CQ4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 PPT1-215ENST00000641471 2368 ntBASIC19.89■□□□□ 0.77
USP31Q70CQ4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 MIR557-201ENST00000385239 98 ntBASIC19.89■□□□□ 0.77
USP31Q70CQ4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 RPSAP31-201ENST00000416648 895 ntBASIC19.89■□□□□ 0.77
USP31Q70CQ4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.89■□□□□ 0.77
USP31Q70CQ4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP31Q70CQ4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
USP31Q70CQ4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms