Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC093525.8-201ENST00000624099 1342 ntBASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 AC098850.1-201ENST00000419919 790 ntBASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 CHCHD2P3-201ENST00000603038 451 ntBASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 AL355385.1-201ENST00000606123 409 ntBASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 ACE3P-201ENST00000423435 1973 ntBASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 AC012508.2-201ENST00000567613 1472 ntBASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NHLRC1Q6VVB1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 AC007787.1-201ENST00000588095 1583 ntBASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 DFFBP1-201ENST00000433250 979 ntBASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 AL353779.1-201ENST00000434793 351 ntBASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 API5-211ENST00000534695 560 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 AC036164.1-201ENST00000570544 333 ntBASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 SAMD11P1-201ENST00000571429 661 ntBASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 LINC02560-201ENST00000596379 459 ntBASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NHLRC1Q6VVB1 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 AL390755.1-201ENST00000623716 2027 ntBASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms