Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRAMEF9Q5VWM5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PRAMEF9Q5VWM5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PRAMEF9Q5VWM5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 AC097359.2-201ENST00000604992 2389 ntBASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 SNX18-202ENST00000343017 3140 ntBASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 AC139749.1-202ENST00000617529 3139 ntBASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 MSTO2P-201ENST00000314835 1709 ntBASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 KLF2P2-201ENST00000416807 1039 ntBASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 AC140912.1-201ENST00000577171 1054 ntBASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRAMEF9Q5VWM5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AL009178.2-201ENST00000597278 2719 ntBASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AL136379.1-201ENST00000623471 2642 ntBASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 NUS1P3-201ENST00000423502 862 ntBASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 CRB3P1-201ENST00000449338 276 ntBASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 TERF1P3-201ENST00000505638 1227 ntBASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AC026434.2-201ENST00000506094 1078 ntBASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 AP001267.2-201ENST00000532619 2086 ntBASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PRAMEF9Q5VWM5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.6□□□□□ -0.07
PRAMEF9Q5VWM5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms