Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 AC007541.1-201ENST00000570282 1469 ntBASIC16.62■□□□□ 0.25
COBLL1Q53SF7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 AC097359.2-201ENST00000604992 2389 ntBASIC16.62■□□□□ 0.25
COBLL1Q53SF7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 MIR661-201ENST00000384842 89 ntBASIC16.62■□□□□ 0.25
COBLL1Q53SF7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 ELK1P1-201ENST00000485699 580 ntBASIC16.62■□□□□ 0.25
COBLL1Q53SF7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 CLUHP6-201ENST00000580789 941 ntBASIC16.62■□□□□ 0.25
COBLL1Q53SF7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COBLL1Q53SF7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 MYCLP2-201ENST00000449268 967 ntBASIC16.61■□□□□ 0.25
COBLL1Q53SF7 TSPY16P-201ENST00000449843 468 ntBASIC16.61■□□□□ 0.25
COBLL1Q53SF7 AC022137.2-201ENST00000503482 481 ntBASIC16.61■□□□□ 0.25
COBLL1Q53SF7 AC022447.6-201ENST00000515522 438 ntBASIC16.61■□□□□ 0.25
COBLL1Q53SF7 AP001063.1-201ENST00000568332 529 ntBASIC16.61■□□□□ 0.25
COBLL1Q53SF7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 AC003102.2-201ENST00000589195 1469 ntBASIC16.61■□□□□ 0.25
COBLL1Q53SF7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.61■□□□□ 0.25
COBLL1Q53SF7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.6■□□□□ 0.25
COBLL1Q53SF7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms