Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH1Q08174 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH1Q08174 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDH1Q08174 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDH1Q08174 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH1Q08174 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 AL139094.1-201ENST00000405549 1188 ntBASIC14.69□□□□□ -0.06
PCDH1Q08174 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDH1Q08174 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDH1Q08174 TSPY16P-201ENST00000449843 468 ntBASIC14.69□□□□□ -0.06
PCDH1Q08174 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDH1Q08174 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDH1Q08174 SPCS2P1-201ENST00000561636 679 ntBASIC14.69□□□□□ -0.06
PCDH1Q08174 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH1Q08174 BX539320.1-201ENST00000623759 877 ntBASIC14.69□□□□□ -0.06
PCDH1Q08174 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
PCDH1Q08174 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH1Q08174 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH1Q08174 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH1Q08174 AC018442.1-201ENST00000421439 2061 ntBASIC14.69□□□□□ -0.06
PCDH1Q08174 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 KRT8P14-201ENST00000414254 1442 ntBASIC14.68□□□□□ -0.06
PCDH1Q08174 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 ACKR1-201ENST00000368121 1240 ntBASIC14.68□□□□□ -0.06
PCDH1Q08174 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 MIR661-201ENST00000384842 89 ntBASIC14.68□□□□□ -0.06
PCDH1Q08174 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH1Q08174 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PCDH1Q08174 AC114812.1-204ENST00000449669 728 ntBASIC14.68□□□□□ -0.06
PCDH1Q08174 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH1Q08174 API5-211ENST00000534695 560 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 ENPP7P5-201ENST00000541031 1031 ntBASIC14.68□□□□□ -0.06
PCDH1Q08174 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH1Q08174 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH1Q08174 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 OR2I1P-209ENST00000641730 5365 ntBASIC14.68□□□□□ -0.06
PCDH1Q08174 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms