Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RPL39P62891 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.82□□□□□ -0.68
RPL39P62891 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RPL39P62891 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RPL39P62891 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.82□□□□□ -0.68
RPL39P62891 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RPL39P62891 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RPL39P62891 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RPL39P62891 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RPL39P62891 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RPL39P62891 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RPL39P62891 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
RPL39P62891 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
RPL39P62891 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 AC012508.2-201ENST00000567613 1472 ntBASIC10.81□□□□□ -0.68
RPL39P62891 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.81□□□□□ -0.68
RPL39P62891 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
RPL39P62891 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
RPL39P62891 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
RPL39P62891 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
RPL39P62891 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 AC079781.3-201ENST00000449110 356 ntBASIC10.81□□□□□ -0.68
RPL39P62891 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.81□□□□□ -0.68
RPL39P62891 IGHV3-22-201ENST00000520721 359 ntBASIC10.81□□□□□ -0.68
RPL39P62891 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.81□□□□□ -0.68
RPL39P62891 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 AC064836.3-201ENST00000607928 673 ntBASIC10.81□□□□□ -0.68
RPL39P62891 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.81□□□□□ -0.68
RPL39P62891 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
RPL39P62891 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 PEG13-201ENST00000631594 5667 ntBASIC10.81□□□□□ -0.68
RPL39P62891 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 AKAP8P1-201ENST00000434743 1349 ntBASIC10.81□□□□□ -0.68
RPL39P62891 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.81□□□□□ -0.68
RPL39P62891 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.81□□□□□ -0.68
RPL39P62891 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RPL39P62891 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.81□□□□□ -0.68
RPL39P62891 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.8□□□□□ -0.68
RPL39P62891 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.8□□□□□ -0.68
RPL39P62891 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RPL39P62891 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.8□□□□□ -0.68
RPL39P62891 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.8□□□□□ -0.68
RPL39P62891 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.8□□□□□ -0.68
RPL39P62891 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.8□□□□□ -0.68
RPL39P62891 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RPL39P62891 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RPL39P62891 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
RPL39P62891 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.8□□□□□ -0.68
RPL39P62891 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.8□□□□□ -0.68
RPL39P62891 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RPL39P62891 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms