Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.37□□□□□ -0.11
RPS3AP61247 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.37□□□□□ -0.11
RPS3AP61247 FAM207CP-201ENST00000443486 507 ntBASIC14.37□□□□□ -0.11
RPS3AP61247 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.37□□□□□ -0.11
RPS3AP61247 SDHAP3-202ENST00000515467 728 ntBASIC14.37□□□□□ -0.11
RPS3AP61247 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.37□□□□□ -0.11
RPS3AP61247 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.37□□□□□ -0.11
RPS3AP61247 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 AC009118.2-201ENST00000613275 655 ntBASIC14.37□□□□□ -0.11
RPS3AP61247 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.37□□□□□ -0.11
RPS3AP61247 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
RPS3AP61247 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 FGD5P1-202ENST00000614866 2498 ntBASIC14.37□□□□□ -0.11
RPS3AP61247 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.37□□□□□ -0.11
RPS3AP61247 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 AC148477.4-201ENST00000613430 1793 ntBASIC14.37□□□□□ -0.11
RPS3AP61247 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS3AP61247 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS3AP61247 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.36□□□□□ -0.11
RPS3AP61247 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 MROH4P-201ENST00000431302 1578 ntBASIC14.36□□□□□ -0.11
RPS3AP61247 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
RPS3AP61247 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS3AP61247 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS3AP61247 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 ZNF890P-202ENST00000530367 1156 ntBASIC14.36□□□□□ -0.11
RPS3AP61247 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.36□□□□□ -0.11
RPS3AP61247 MIR3197-201ENST00000582241 73 ntBASIC14.36□□□□□ -0.11
RPS3AP61247 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPS3AP61247 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 AL928921.2-201ENST00000641325 2442 ntBASIC14.36□□□□□ -0.11
RPS3AP61247 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS3AP61247 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPS3AP61247 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 AJ011931.1-201ENST00000618749 2492 ntBASIC14.35□□□□□ -0.11
RPS3AP61247 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms