Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.37■□□□□ 0.05
WNT3AP56704 AP005019.2-201ENST00000615104 511 ntBASIC15.37■□□□□ 0.05
WNT3AP56704 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
WNT3AP56704 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3AP56704 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3AP56704 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3AP56704 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3AP56704 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3AP56704 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
WNT3AP56704 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3AP56704 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3AP56704 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3AP56704 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3AP56704 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.37■□□□□ 0.05
WNT3AP56704 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3AP56704 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.36■□□□□ 0.05
WNT3AP56704 ACKR1-201ENST00000368121 1240 ntBASIC15.36■□□□□ 0.05
WNT3AP56704 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
WNT3AP56704 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.36■□□□□ 0.05
WNT3AP56704 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.36■□□□□ 0.05
WNT3AP56704 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.36■□□□□ 0.05
WNT3AP56704 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.36■□□□□ 0.05
WNT3AP56704 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.36■□□□□ 0.05
WNT3AP56704 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
WNT3AP56704 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.36■□□□□ 0.05
WNT3AP56704 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.36■□□□□ 0.05
WNT3AP56704 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
WNT3AP56704 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.36■□□□□ 0.05
WNT3AP56704 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.36■□□□□ 0.05
WNT3AP56704 AC007686.3-201ENST00000619017 3487 ntBASIC15.36■□□□□ 0.05
WNT3AP56704 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
WNT3AP56704 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
WNT3AP56704 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
WNT3AP56704 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.35■□□□□ 0.05
WNT3AP56704 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.35■□□□□ 0.05
WNT3AP56704 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.35■□□□□ 0.05
WNT3AP56704 AC093433.1-201ENST00000458048 571 ntBASIC15.35■□□□□ 0.05
WNT3AP56704 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.35■□□□□ 0.05
WNT3AP56704 AC022616.1-201ENST00000518688 554 ntBASIC15.35■□□□□ 0.05
WNT3AP56704 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.35■□□□□ 0.05
WNT3AP56704 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.35■□□□□ 0.05
WNT3AP56704 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.35■□□□□ 0.05
WNT3AP56704 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
WNT3AP56704 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
WNT3AP56704 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
WNT3AP56704 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms