Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH12P55289 AC113367.3-201ENST00000508316 1912 ntBASIC14.25□□□□□ -0.13
CDH12P55289 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 AC012508.2-201ENST00000567613 1472 ntBASIC14.25□□□□□ -0.13
CDH12P55289 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 AC041040.2-201ENST00000622926 2899 ntBASIC14.24□□□□□ -0.13
CDH12P55289 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CDH12P55289 AC027601.5-201ENST00000624065 2482 ntBASIC14.24□□□□□ -0.13
CDH12P55289 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 REXO1L4P-201ENST00000605109 1937 ntBASIC14.24□□□□□ -0.13
CDH12P55289 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDH12P55289 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDH12P55289 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 DNAJB3-202ENST00000449667 1266 ntBASIC14.24□□□□□ -0.13
CDH12P55289 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH12P55289 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.24□□□□□ -0.13
CDH12P55289 AC025048.3-201ENST00000590609 569 ntBASIC14.24□□□□□ -0.13
CDH12P55289 AC005702.4-201ENST00000618393 416 ntBASIC14.24□□□□□ -0.13
CDH12P55289 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH12P55289 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH12P55289 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH12P55289 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH12P55289 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CDH12P55289 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 AC006504.5-208ENST00000588784 2401 ntBASIC14.23□□□□□ -0.13
CDH12P55289 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.23□□□□□ -0.13
CDH12P55289 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH12P55289 AL139400.1-201ENST00000366220 510 ntBASIC14.23□□□□□ -0.13
CDH12P55289 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 HLA-V-204ENST00000476601 1289 ntBASIC14.23□□□□□ -0.13
CDH12P55289 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CDH12P55289 AC015910.1-201ENST00000579400 975 ntBASIC14.23□□□□□ -0.13
CDH12P55289 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CDH12P55289 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH12P55289 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms