Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.3■□□□□ 0.2
SSR1P43307 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 AC079781.5-202ENST00000641784 3743 ntBASIC16.3■□□□□ 0.2
SSR1P43307 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.29■□□□□ 0.2
SSR1P43307 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 PEG13-201ENST00000631594 5667 ntBASIC16.29■□□□□ 0.2
SSR1P43307 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SSR1P43307 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSR1P43307 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.29■□□□□ 0.2
SSR1P43307 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.29■□□□□ 0.2
SSR1P43307 AC067863.1-201ENST00000494933 530 ntBASIC16.29■□□□□ 0.2
SSR1P43307 SDHAP3-202ENST00000515467 728 ntBASIC16.29■□□□□ 0.2
SSR1P43307 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 AC015910.1-201ENST00000579400 975 ntBASIC16.29■□□□□ 0.2
SSR1P43307 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.29■□□□□ 0.2
SSR1P43307 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 AC074044.1-201ENST00000609673 707 ntBASIC16.29■□□□□ 0.2
SSR1P43307 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSR1P43307 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR1P43307 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR1P43307 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.28■□□□□ 0.2
SSR1P43307 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SSR1P43307 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 MIR943-201ENST00000401286 94 ntBASIC16.28■□□□□ 0.2
SSR1P43307 METTL21AP1-201ENST00000438852 635 ntBASIC16.28■□□□□ 0.2
SSR1P43307 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.28■□□□□ 0.2
SSR1P43307 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 AC044860.1-202ENST00000559481 777 ntBASIC16.28■□□□□ 0.2
SSR1P43307 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.28■□□□□ 0.2
SSR1P43307 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.28■□□□□ 0.2
SSR1P43307 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SSR1P43307 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR1P43307 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR1P43307 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR1P43307 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.27■□□□□ 0.2
SSR1P43307 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSR1P43307 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR1P43307 KRT18P28-201ENST00000453838 1332 ntBASIC16.27■□□□□ 0.2
SSR1P43307 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms