Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 AC211429.1-201ENST00000415277 523 ntBASIC11.26□□□□□ -0.61
CKS2P33552 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.26□□□□□ -0.61
CKS2P33552 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.26□□□□□ -0.61
CKS2P33552 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
CKS2P33552 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.26□□□□□ -0.61
CKS2P33552 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 AC061975.2-201ENST00000581722 295 ntBASIC11.26□□□□□ -0.61
CKS2P33552 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.26□□□□□ -0.61
CKS2P33552 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CKS2P33552 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.26□□□□□ -0.61
CKS2P33552 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 AC138969.3-201ENST00000546612 1459 ntBASIC11.25□□□□□ -0.61
CKS2P33552 AC138932.2-201ENST00000548268 1459 ntBASIC11.25□□□□□ -0.61
CKS2P33552 AC126755.4-201ENST00000549796 1459 ntBASIC11.25□□□□□ -0.61
CKS2P33552 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.25□□□□□ -0.61
CKS2P33552 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.25□□□□□ -0.61
CKS2P33552 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.25□□□□□ -0.61
CKS2P33552 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 RPS8P6-201ENST00000426177 609 ntBASIC11.25□□□□□ -0.61
CKS2P33552 GHSR-202ENST00000427970 912 ntBASIC11.25□□□□□ -0.61
CKS2P33552 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 RPS2P1-201ENST00000434010 821 ntBASIC11.25□□□□□ -0.61
CKS2P33552 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
CKS2P33552 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.25□□□□□ -0.61
CKS2P33552 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
CKS2P33552 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.25□□□□□ -0.61
CKS2P33552 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
CKS2P33552 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms