Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
RARAP10276 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.97■□□□□ 0.15
RARAP10276 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.97■□□□□ 0.15
RARAP10276 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 AC004066.1-201ENST00000502488 802 ntBASIC15.97■□□□□ 0.15
RARAP10276 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.97■□□□□ 0.15
RARAP10276 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RARAP10276 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.97■□□□□ 0.15
RARAP10276 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 AP001267.2-201ENST00000532619 2086 ntBASIC15.97■□□□□ 0.15
RARAP10276 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
RARAP10276 AC015656.1-201ENST00000624209 3578 ntBASIC15.97■□□□□ 0.15
RARAP10276 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RARAP10276 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.97■□□□□ 0.15
RARAP10276 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 AC007787.1-201ENST00000588095 1583 ntBASIC15.96■□□□□ 0.15
RARAP10276 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.96■□□□□ 0.15
RARAP10276 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RARAP10276 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.96■□□□□ 0.15
RARAP10276 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.96■□□□□ 0.15
RARAP10276 MEP1AP4-201ENST00000423244 1087 ntBASIC15.96■□□□□ 0.15
RARAP10276 SPTLC1P1-201ENST00000447199 261 ntBASIC15.96■□□□□ 0.15
RARAP10276 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.96■□□□□ 0.15
RARAP10276 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.96■□□□□ 0.15
RARAP10276 AC026410.3-201ENST00000514280 936 ntBASIC15.96■□□□□ 0.15
RARAP10276 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.96■□□□□ 0.15
RARAP10276 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms