Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 RN7SKP230-201ENST00000365642 335 ntBASIC18.19■□□□□ 0.5
CHGBP05060 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.19■□□□□ 0.5
CHGBP05060 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.19■□□□□ 0.5
CHGBP05060 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.19■□□□□ 0.5
CHGBP05060 C2orf27AP3-201ENST00000434123 579 ntBASIC18.19■□□□□ 0.5
CHGBP05060 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHGBP05060 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.19■□□□□ 0.5
CHGBP05060 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.19■□□□□ 0.5
CHGBP05060 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.19■□□□□ 0.5
CHGBP05060 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.19■□□□□ 0.5
CHGBP05060 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.19■□□□□ 0.5
CHGBP05060 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.19■□□□□ 0.5
CHGBP05060 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.19■□□□□ 0.5
CHGBP05060 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.19■□□□□ 0.5
CHGBP05060 AL354718.3-201ENST00000616414 581 ntBASIC18.19■□□□□ 0.5
CHGBP05060 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.19■□□□□ 0.5
CHGBP05060 AC132938.4-201ENST00000623835 848 ntBASIC18.19■□□□□ 0.5
CHGBP05060 CR382287.1-201ENST00000623954 586 ntBASIC18.19■□□□□ 0.5
CHGBP05060 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.19■□□□□ 0.5
CHGBP05060 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHGBP05060 AC007686.3-201ENST00000619017 3487 ntBASIC18.19■□□□□ 0.5
CHGBP05060 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.19■□□□□ 0.5
CHGBP05060 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 CICP14-201ENST00000629111 2732 ntBASIC18.18■□□□□ 0.5
CHGBP05060 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CHGBP05060 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.18■□□□□ 0.5
CHGBP05060 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.18■□□□□ 0.5
CHGBP05060 RN7SL48P-201ENST00000579283 293 ntBASIC18.18■□□□□ 0.5
CHGBP05060 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.18■□□□□ 0.5
CHGBP05060 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 AC009542.2-202ENST00000619004 1067 ntBASIC18.18■□□□□ 0.5
CHGBP05060 AL033527.4-201ENST00000641026 673 ntBASIC18.18■□□□□ 0.5
CHGBP05060 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 TSPY26P-202ENST00000565928 3884 ntBASIC18.18■□□□□ 0.5
CHGBP05060 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHGBP05060 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.18■□□□□ 0.5
CHGBP05060 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 MTHFR-210ENST00000641407 2387 ntBASIC18.18■□□□□ 0.5
CHGBP05060 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CHGBP05060 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHGBP05060 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.17■□□□□ 0.5
CHGBP05060 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.17■□□□□ 0.5
CHGBP05060 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.17■□□□□ 0.5
CHGBP05060 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHGBP05060 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.17■□□□□ 0.5
CHGBP05060 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
CHGBP05060 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHGBP05060 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms