Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.34■□□□□ 0.05
GPC4O75487 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.34■□□□□ 0.05
GPC4O75487 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
GPC4O75487 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.34■□□□□ 0.05
GPC4O75487 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
GPC4O75487 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
GPC4O75487 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
GPC4O75487 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.34■□□□□ 0.05
GPC4O75487 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 AC026748.1-201ENST00000624349 3251 ntBASIC15.34■□□□□ 0.05
GPC4O75487 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GPC4O75487 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GPC4O75487 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
GPC4O75487 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.33■□□□□ 0.05
GPC4O75487 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GPC4O75487 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GPC4O75487 MROH4P-201ENST00000431302 1578 ntBASIC15.33■□□□□ 0.05
GPC4O75487 AC084364.1-201ENST00000551967 1556 ntBASIC15.33■□□□□ 0.05
GPC4O75487 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GPC4O75487 AC023024.2-201ENST00000623561 1993 ntBASIC15.33■□□□□ 0.05
GPC4O75487 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 SPTLC1P1-201ENST00000447199 261 ntBASIC15.33■□□□□ 0.04
GPC4O75487 TSPY16P-201ENST00000449843 468 ntBASIC15.33■□□□□ 0.04
GPC4O75487 KRT18P43-201ENST00000469825 1281 ntBASIC15.33■□□□□ 0.04
GPC4O75487 DOC2GP-202ENST00000514950 1163 ntBASIC15.33■□□□□ 0.04
GPC4O75487 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.33■□□□□ 0.04
GPC4O75487 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.33■□□□□ 0.04
GPC4O75487 AC011467.4-201ENST00000594891 528 ntBASIC15.33■□□□□ 0.04
GPC4O75487 AC000095.1-201ENST00000603208 874 ntBASIC15.33■□□□□ 0.04
GPC4O75487 AC009118.2-201ENST00000613275 655 ntBASIC15.33■□□□□ 0.04
GPC4O75487 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
GPC4O75487 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.33■□□□□ 0.04
GPC4O75487 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GPC4O75487 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GPC4O75487 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GPC4O75487 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GPC4O75487 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GPC4O75487 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.33■□□□□ 0.04
GPC4O75487 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GPC4O75487 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GPC4O75487 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.32■□□□□ 0.04
GPC4O75487 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 MIR661-201ENST00000384842 89 ntBASIC15.32■□□□□ 0.04
GPC4O75487 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.32■□□□□ 0.04
GPC4O75487 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.32■□□□□ 0.04
GPC4O75487 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.32■□□□□ 0.04
GPC4O75487 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.32■□□□□ 0.04
GPC4O75487 AL158212.4-201ENST00000624062 1286 ntBASIC15.32■□□□□ 0.04
GPC4O75487 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GPC4O75487 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.32■□□□□ 0.04
GPC4O75487 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms