Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 REXO1L4P-201ENST00000605109 1937 ntBASIC12.48□□□□□ -0.41
SSSCA1O60232 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.47□□□□□ -0.41
SSSCA1O60232 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.47□□□□□ -0.41
SSSCA1O60232 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 RNA5SP415-201ENST00000517246 115 ntBASIC12.47□□□□□ -0.41
SSSCA1O60232 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.47□□□□□ -0.41
SSSCA1O60232 AC099522.2-201ENST00000607001 744 ntBASIC12.47□□□□□ -0.41
SSSCA1O60232 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 AC008267.7-201ENST00000624570 1194 ntBASIC12.47□□□□□ -0.41
SSSCA1O60232 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SSSCA1O60232 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 AC007787.1-201ENST00000588095 1583 ntBASIC12.47□□□□□ -0.41
SSSCA1O60232 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSSCA1O60232 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.47□□□□□ -0.41
SSSCA1O60232 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SSSCA1O60232 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.46□□□□□ -0.41
SSSCA1O60232 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SSSCA1O60232 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.46□□□□□ -0.41
SSSCA1O60232 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.46□□□□□ -0.41
SSSCA1O60232 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.46□□□□□ -0.41
SSSCA1O60232 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.46□□□□□ -0.41
SSSCA1O60232 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SSSCA1O60232 AL773604.1-201ENST00000617417 272 ntBASIC12.46□□□□□ -0.41
SSSCA1O60232 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SSSCA1O60232 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.46□□□□□ -0.41
SSSCA1O60232 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms