Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC3O15379 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 AL627223.1-201ENST00000416693 442 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HDAC3O15379 GPS2P2-201ENST00000430745 888 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 RBPMS2P1-201ENST00000437762 623 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 SPDYE14P-201ENST00000442619 822 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC3O15379 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.85□□□□□ -0.03
HDAC3O15379 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.85□□□□□ -0.03
HDAC3O15379 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC3O15379 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 MTDHP5-201ENST00000598980 586 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.85□□□□□ -0.03
HDAC3O15379 AL033527.5-202ENST00000641632 1098 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
HDAC3O15379 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 AL360270.3-201ENST00000609118 1348 ntBASIC14.85□□□□□ -0.03
HDAC3O15379 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC3O15379 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC3O15379 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HDAC3O15379 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HDAC3O15379 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HDAC3O15379 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HDAC3O15379 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.84□□□□□ -0.03
HDAC3O15379 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HDAC3O15379 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC3O15379 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 FDX1P1-201ENST00000449115 551 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 ALG1L5P-201ENST00000482043 771 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC3O15379 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC3O15379 AC093520.2-201ENST00000561830 333 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 AC026150.2-201ENST00000564693 1156 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
HDAC3O15379 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC3O15379 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC3O15379 AL513210.1-201ENST00000629608 234 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 AC011474.4-201ENST00000623523 2076 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.84□□□□□ -0.03
HDAC3O15379 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC3O15379 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 MBLAC2-202ENST00000514906 1936 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 AC018665.1-201ENST00000622927 1362 ntBASIC14.84□□□□□ -0.03
HDAC3O15379 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.84□□□□□ -0.03
HDAC3O15379 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC3O15379 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms