Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 U91328.1-201ENST00000437528 223 ntBASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC007389.4-201ENST00000454674 793 ntBASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC092552.1-201ENST00000547243 906 ntBASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HNRNPUP1-201ENST00000554987 333 ntBASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RAB43P1-201ENST00000561790 589 ntBASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 WFDC1-204ENST00000613603 549 ntBASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ARSEP1-201ENST00000420443 635 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms