Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 AC004449.1-201ENST00000564240 433 ntBASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 AC004835.2-201ENST00000603762 682 ntBASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 AC152010.1-201ENST00000415779 2006 ntBASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FOXJ3Q9UPW0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC138969.3-201ENST00000546612 1459 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC138932.2-201ENST00000548268 1459 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC126755.4-201ENST00000549796 1459 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AL139400.1-201ENST00000366220 510 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC004461.1-201ENST00000412461 403 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 RN7SL828P-201ENST00000607615 303 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AL133215.2-201ENST00000609242 977 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC105339.1-204ENST00000636249 355 ntBASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FOXJ3Q9UPW0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms