Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMBRD1Q9NUN5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.46■□□□□ 0.38
LMBRD1Q9NUN5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 TOMM22P5-201ENST00000416399 439 ntBASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 AC023274.1-201ENST00000418278 595 ntBASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 IL9RP2-201ENST00000423948 1312 ntBASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LMBRD1Q9NUN5 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 KRT18P43-201ENST00000469825 1281 ntBASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AC003101.2-201ENST00000612557 442 ntBASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 LINC00628-201ENST00000628516 1289 ntBASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AC023794.5-201ENST00000564380 2157 ntBASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 AC020910.6-201ENST00000623084 1459 ntBASIC17.44■□□□□ 0.38
LMBRD1Q9NUN5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LMBRD1Q9NUN5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.43■□□□□ 0.38
LMBRD1Q9NUN5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LMBRD1Q9NUN5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 431.5 ms