Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 AC096734.2-201ENST00000562054 433 ntBASIC13.94□□□□□ -0.18
HMG20AQ9NP66 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 HLA-A-201ENST00000376802 1334 ntBASIC13.93□□□□□ -0.18
HMG20AQ9NP66 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 CES1P1-201ENST00000421606 1704 ntBASIC13.93□□□□□ -0.18
HMG20AQ9NP66 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.93□□□□□ -0.18
HMG20AQ9NP66 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 RHOQP3-201ENST00000437982 621 ntBASIC13.93□□□□□ -0.18
HMG20AQ9NP66 AC079776.4-201ENST00000511039 504 ntBASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMG20AQ9NP66 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AC015818.8-201ENST00000587907 1519 ntBASIC13.92□□□□□ -0.18
HMG20AQ9NP66 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AC083964.2-201ENST00000623988 2396 ntBASIC13.92□□□□□ -0.18
HMG20AQ9NP66 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms