Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 AC135586.1-201ENST00000539323 574 ntBASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 CICP14-201ENST00000629111 2732 ntBASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 AC022144.1-201ENST00000602255 1580 ntBASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NEUROD4Q9HD90 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms