Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NEFHP1-201ENST00000412845 2629 ntBASIC13.77□□□□□ -0.2
CHD8Q9HCK8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 AC106886.4-201ENST00000623557 2502 ntBASIC13.77□□□□□ -0.2
CHD8Q9HCK8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 AC078925.2-201ENST00000624013 1973 ntBASIC13.77□□□□□ -0.2
CHD8Q9HCK8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 SNORA57-201ENST00000383870 149 ntBASIC13.77□□□□□ -0.21
CHD8Q9HCK8 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 AC147876.1-201ENST00000504408 322 ntBASIC13.77□□□□□ -0.21
CHD8Q9HCK8 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 TMBIM7P-202ENST00000641474 1516 ntBASIC13.77□□□□□ -0.21
CHD8Q9HCK8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.77□□□□□ -0.21
CHD8Q9HCK8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 OR51A9P-201ENST00000422578 911 ntBASIC13.76□□□□□ -0.21
CHD8Q9HCK8 FDPSP7-201ENST00000429043 1054 ntBASIC13.76□□□□□ -0.21
CHD8Q9HCK8 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 PYY2-201ENST00000315776 282 ntBASIC13.76□□□□□ -0.21
CHD8Q9HCK8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 AL773545.2-201ENST00000442149 472 ntBASIC13.76□□□□□ -0.21
CHD8Q9HCK8 RN7SL578P-201ENST00000477781 283 ntBASIC13.76□□□□□ -0.21
CHD8Q9HCK8 GPX3-202ENST00000517973 612 ntTSL 3 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 ABCC6P2-201ENST00000526069 590 ntBASIC13.76□□□□□ -0.21
CHD8Q9HCK8 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHD8Q9HCK8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AL137783.1-201ENST00000623494 1896 ntBASIC13.75□□□□□ -0.21
CHD8Q9HCK8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms