Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 AC007787.1-201ENST00000588095 1583 ntBASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 REXO1L4P-201ENST00000605109 1937 ntBASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 HTR5BP-201ENST00000430851 1154 ntBASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 RN7SL828P-201ENST00000607615 303 ntBASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COMMD4Q9H0A8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 AC018529.2-202ENST00000611482 3087 ntBASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms