Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 AL109837.1-201ENST00000603272 613 ntBASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 FAM90A2P-201ENST00000511144 1395 ntBASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 FAM90A25P-201ENST00000528404 1395 ntBASIC19.43■□□□□ 0.7
PCDH11YQ9BZA8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 CYP4F23P-201ENST00000593402 1579 ntBASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AL627231.1-201ENST00000394467 1125 ntBASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AC078991.1-201ENST00000437297 610 ntBASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AL035414.1-201ENST00000451327 857 ntBASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AC026803.1-201ENST00000569130 274 ntBASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 CAP2P1-201ENST00000557743 1390 ntBASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH11YQ9BZA8 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 MIR3677-201ENST00000578964 60 ntBASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 AC103810.10-201ENST00000606504 343 ntBASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 AC092171.5-201ENST00000608012 942 ntBASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 AC133540.1-201ENST00000620845 1019 ntBASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 AC007718.1-201ENST00000621078 280 ntBASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 FRMPD2B-201ENST00000431305 1347 ntBASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH11YQ9BZA8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11YQ9BZA8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms