Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 AC005089.1-201ENST00000619486 2241 ntBASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 RNU1-114P-201ENST00000365297 166 ntBASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 PIN1P1-201ENST00000412108 996 ntBASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 AC005252.2-201ENST00000624630 1141 ntBASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
PDLIM5Q96HC4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDLIM5Q96HC4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 ACTBP8-201ENST00000403258 1108 ntBASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 AC002472.2-201ENST00000442739 958 ntBASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 AP001063.1-201ENST00000568332 529 ntBASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDLIM5Q96HC4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms