Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 RPSAP15-201ENST00000448168 861 ntBASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 DUTP3-201ENST00000450025 415 ntBASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 MRPL22P1-201ENST00000505398 616 ntBASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 MIR3180-2-201ENST00000581748 88 ntBASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 AC027601.3-201ENST00000622907 509 ntBASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 AP001184.1-201ENST00000637936 376 ntBASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM43Q96BQ3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 AL645933.1-201ENST00000440087 609 ntBASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 AC006158.1-201ENST00000610661 249 ntBASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 AC009560.1-201ENST00000620208 434 ntBASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 AL359258.3-201ENST00000622910 2331 ntBASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 AC009090.5-201ENST00000624886 2285 ntBASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM43Q96BQ3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms