Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 AC016397.2-201ENST00000624848 1985 ntBASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC9.94□□□□□ -0.82
SMIM11BQ8TCY0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 KRT8P24-201ENST00000560290 1559 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC015818.8-201ENST00000587907 1519 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 KRT8P22-201ENST00000562317 1415 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 RPS8P6-201ENST00000426177 609 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 KRT18P27-201ENST00000427733 1299 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SCARNA2-201ENST00000458748 420 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 CXCL1P1-201ENST00000502804 216 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 HNRNPUP1-201ENST00000554987 333 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC061975.2-201ENST00000581722 295 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC107918.4-202ENST00000641623 219 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 AC019294.4-201ENST00000561777 2905 ntBASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SMIM11BQ8TCY0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms