Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 WASH4P-201ENST00000564273 1246 ntBASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 CTBP2P3-201ENST00000585629 1255 ntBASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 AC008494.3-201ENST00000606615 944 ntBASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PCDH19Q8TAB3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AC068587.6-202ENST00000641839 5619 ntBASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 DGCR5-201ENST00000399539 862 ntBASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 NUS1P3-201ENST00000423502 862 ntBASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AP001582.1-201ENST00000525856 295 ntBASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 AC023908.3-201ENST00000564211 3047 ntBASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH19Q8TAB3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDH19Q8TAB3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.71■□□□□ 0.1
PCDH19Q8TAB3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDH19Q8TAB3 AC140479.7-201ENST00000636301 2332 ntBASIC15.71■□□□□ 0.1
PCDH19Q8TAB3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 AC023090.2-201ENST00000625182 2110 ntBASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms