Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 AC134915.1-201ENST00000426461 574 ntBASIC14.28□□□□□ -0.12
NUP43Q8NFH3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 AC004233.3-201ENST00000607794 1269 ntBASIC14.28□□□□□ -0.12
NUP43Q8NFH3 AC093726.1-201ENST00000608064 963 ntBASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 CICP14-201ENST00000629111 2732 ntBASIC14.28□□□□□ -0.12
NUP43Q8NFH3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 REXO1L5P-201ENST00000622260 2098 ntBASIC14.27□□□□□ -0.12
NUP43Q8NFH3 INTS4P2-202ENST00000614726 2019 ntBASIC14.27□□□□□ -0.12
NUP43Q8NFH3 AL390755.1-201ENST00000623716 2027 ntBASIC14.27□□□□□ -0.12
NUP43Q8NFH3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 AC007541.1-201ENST00000570282 1469 ntBASIC14.27□□□□□ -0.12
NUP43Q8NFH3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NUP43Q8NFH3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 AL645937.2-201ENST00000396808 931 ntBASIC14.27□□□□□ -0.13
NUP43Q8NFH3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 DFFBP1-201ENST00000433250 979 ntBASIC14.27□□□□□ -0.13
NUP43Q8NFH3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 AC123567.1-201ENST00000548294 1261 ntBASIC14.27□□□□□ -0.13
NUP43Q8NFH3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 AL132655.2-201ENST00000596276 594 ntBASIC14.27□□□□□ -0.13
NUP43Q8NFH3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 AL513477.1-201ENST00000602865 2407 ntBASIC14.27□□□□□ -0.13
NUP43Q8NFH3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NUP43Q8NFH3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms