Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ARHGEF39Q8N4T4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 RN7SKP230-201ENST00000365642 335 ntBASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 AL583810.1-201ENST00000553344 1045 ntBASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 AHCYP2-201ENST00000430630 1300 ntBASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.3□□□□□ -0.12
ARHGEF39Q8N4T4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AL391280.1-201ENST00000506969 1062 ntBASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AC138696.2-201ENST00000607376 223 ntBASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 AP000593.2-201ENST00000542775 1433 ntBASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARHGEF39Q8N4T4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms