Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 RPL13AP25-201ENST00000484130 612 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 AC123567.1-201ENST00000548294 1261 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 AC099568.2-201ENST00000609194 695 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 AC008761.3-201ENST00000624803 892 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC013726.1-201ENST00000563747 2285 ntBASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC134915.1-201ENST00000426461 574 ntBASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC002472.2-201ENST00000442739 958 ntBASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 MIR4745-201ENST00000577608 62 ntBASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 CHCHD2P3-201ENST00000603038 451 ntBASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AC093726.1-201ENST00000608064 963 ntBASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 FGD5P1-202ENST00000614866 2498 ntBASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC116Q8IYX3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AL157414.3-201ENST00000624276 1954 ntBASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms