Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC105Q8IYK2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC105Q8IYK2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CCDC105Q8IYK2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 MIR4313-201ENST00000580760 101 ntBASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC105Q8IYK2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AC108725.1-201ENST00000495472 409 ntBASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AC104596.2-201ENST00000512793 793 ntBASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 RPSAP52-203ENST00000622976 1023 ntBASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC105Q8IYK2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms