Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 KRT18P36-201ENST00000411618 1276 ntBASIC18.72■□□□□ 0.59
COL23A1Q86Y22 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 DDX39AP1-201ENST00000445147 1181 ntBASIC18.72■□□□□ 0.59
COL23A1Q86Y22 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 AC093909.3-201ENST00000504783 336 ntBASIC18.72■□□□□ 0.59
COL23A1Q86Y22 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 REXO1L4P-201ENST00000605109 1937 ntBASIC18.72■□□□□ 0.59
COL23A1Q86Y22 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AQP7P5-201ENST00000428759 1049 ntBASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AQP7P4-201ENST00000447083 1042 ntBASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AQP7P2-201ENST00000453967 1041 ntBASIC18.71■□□□□ 0.59
COL23A1Q86Y22 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 BX088702.1-201ENST00000610784 235 ntBASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AQP7P3-201ENST00000624547 1041 ntBASIC18.71■□□□□ 0.59
COL23A1Q86Y22 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL23A1Q86Y22 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 KRT17P4-201ENST00000429445 819 ntBASIC18.7■□□□□ 0.58
COL23A1Q86Y22 GCSHP3-201ENST00000431120 391 ntBASIC18.7■□□□□ 0.58
COL23A1Q86Y22 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 MIR4472-1-201ENST00000584349 80 ntBASIC18.7■□□□□ 0.58
COL23A1Q86Y22 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 AC084018.2-201ENST00000613093 2607 ntBASIC18.7■□□□□ 0.58
COL23A1Q86Y22 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL23A1Q86Y22 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms