Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 HIST3H2BA-201ENST00000436555 524 ntBASIC15.81■□□□□ 0.12
CCDC25Q86WR0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 FAM197Y3-203ENST00000618346 717 ntBASIC15.81■□□□□ 0.12
CCDC25Q86WR0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC25Q86WR0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 REXO1L4P-201ENST00000605109 1937 ntBASIC15.8■□□□□ 0.12
CCDC25Q86WR0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 YBX2P1-201ENST00000394192 760 ntBASIC15.8■□□□□ 0.12
CCDC25Q86WR0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 BANF1P1-201ENST00000553684 263 ntBASIC15.8■□□□□ 0.12
CCDC25Q86WR0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 AL121894.2-201ENST00000602977 491 ntBASIC15.8■□□□□ 0.12
CCDC25Q86WR0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC25Q86WR0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.79■□□□□ 0.12
CCDC25Q86WR0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 AC018442.1-201ENST00000421439 2061 ntBASIC15.79■□□□□ 0.12
CCDC25Q86WR0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC25Q86WR0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms