Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 RPS15P9-201ENST00000494093 319 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 AL136038.3-201ENST00000561909 1096 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 AC092329.2-201ENST00000598402 547 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 AC099336.1-202ENST00000602961 463 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 AL691432.1-201ENST00000596308 1422 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 PMS2P7-201ENST00000506558 1336 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 TSSC2-201ENST00000450217 709 ntBASIC11.56□□□□□ -0.56
MRPL54Q6P161 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 AC132008.2-207ENST00000454517 770 ntBASIC11.56□□□□□ -0.56
MRPL54Q6P161 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 AP002414.4-201ENST00000589764 1148 ntBASIC11.56□□□□□ -0.56
MRPL54Q6P161 AL450472.2-201ENST00000603663 1156 ntBASIC11.56□□□□□ -0.56
MRPL54Q6P161 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 AC138969.3-201ENST00000546612 1459 ntBASIC11.56□□□□□ -0.56
MRPL54Q6P161 AC138932.2-201ENST00000548268 1459 ntBASIC11.56□□□□□ -0.56
MRPL54Q6P161 AC126755.4-201ENST00000549796 1459 ntBASIC11.56□□□□□ -0.56
MRPL54Q6P161 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL54Q6P161 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
MRPL54Q6P161 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms