Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AC093028.1-201ENST00000622998 982 ntBASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 PRSS30P-206ENST00000641773 873 ntBASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKAL1Q5VV42 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 FAM86LP-201ENST00000478302 853 ntBASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKAL1Q5VV42 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 RARRES2P5-201ENST00000564013 466 ntBASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 DUX4L47-201ENST00000566374 394 ntBASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKAL1Q5VV42 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms