Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 C1QBPP1-201ENST00000400117 770 ntBASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AC123567.1-201ENST00000548294 1261 ntBASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AL132655.2-201ENST00000596276 594 ntBASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AL096865.1-201ENST00000606796 927 ntBASIC18.21■□□□□ 0.51
RNF20Q5VTR2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 MIR8072-201ENST00000614241 80 ntBASIC18.21■□□□□ 0.51
RNF20Q5VTR2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AL390755.1-201ENST00000623716 2027 ntBASIC18.21■□□□□ 0.51
RNF20Q5VTR2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RNF20Q5VTR2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF20Q5VTR2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF20Q5VTR2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
RNF20Q5VTR2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.21■□□□□ 0.5
RNF20Q5VTR2 AL157414.3-201ENST00000624276 1954 ntBASIC18.21■□□□□ 0.5
RNF20Q5VTR2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RNF20Q5VTR2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 AC092552.1-201ENST00000547243 906 ntBASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF20Q5VTR2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 AC007292.2-201ENST00000593524 1812 ntBASIC18.19■□□□□ 0.5
RNF20Q5VTR2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 SOCS2P1-201ENST00000417727 557 ntBASIC18.19■□□□□ 0.5
RNF20Q5VTR2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 BCRP1-201ENST00000444246 691 ntBASIC18.19■□□□□ 0.5
RNF20Q5VTR2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF20Q5VTR2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms