Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 RPL5P21-201ENST00000404620 815 ntBASIC14.84□□□□□ -0.03
YBX1P67809 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 RN7SL837P-201ENST00000463010 287 ntBASIC14.84□□□□□ -0.03
YBX1P67809 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.84□□□□□ -0.03
YBX1P67809 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.84□□□□□ -0.03
YBX1P67809 CLUHP6-201ENST00000580789 941 ntBASIC14.84□□□□□ -0.03
YBX1P67809 AC133539.2-201ENST00000604757 467 ntBASIC14.84□□□□□ -0.03
YBX1P67809 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 IGHV3-72-202ENST00000621503 303 ntBASIC14.84□□□□□ -0.03
YBX1P67809 AC005252.2-201ENST00000624630 1141 ntBASIC14.84□□□□□ -0.03
YBX1P67809 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.84□□□□□ -0.03
YBX1P67809 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
YBX1P67809 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
YBX1P67809 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
YBX1P67809 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
YBX1P67809 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.83□□□□□ -0.04
YBX1P67809 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.83□□□□□ -0.04
YBX1P67809 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 AC018529.2-202ENST00000611482 3087 ntBASIC14.83□□□□□ -0.04
YBX1P67809 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
YBX1P67809 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
YBX1P67809 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.83□□□□□ -0.04
YBX1P67809 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.83□□□□□ -0.04
YBX1P67809 AP006294.1-201ENST00000415407 339 ntBASIC14.83□□□□□ -0.04
YBX1P67809 TMEM14DP-201ENST00000422205 345 ntBASIC14.83□□□□□ -0.04
YBX1P67809 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
YBX1P67809 RN7SL752P-201ENST00000463779 287 ntBASIC14.83□□□□□ -0.04
YBX1P67809 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.83□□□□□ -0.04
YBX1P67809 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.83□□□□□ -0.04
YBX1P67809 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.83□□□□□ -0.04
YBX1P67809 CU634019.7-201ENST00000624153 1185 ntBASIC14.83□□□□□ -0.04
YBX1P67809 FP236241.2-201ENST00000624906 1185 ntBASIC14.83□□□□□ -0.04
YBX1P67809 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.83□□□□□ -0.04
YBX1P67809 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.83□□□□□ -0.04
YBX1P67809 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.83□□□□□ -0.04
YBX1P67809 AP001267.2-201ENST00000532619 2086 ntBASIC14.83□□□□□ -0.04
YBX1P67809 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
YBX1P67809 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
YBX1P67809 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
YBX1P67809 REXO1L4P-201ENST00000605109 1937 ntBASIC14.82□□□□□ -0.04
YBX1P67809 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
YBX1P67809 AC007787.1-201ENST00000588095 1583 ntBASIC14.82□□□□□ -0.04
YBX1P67809 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.82□□□□□ -0.04
YBX1P67809 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms