Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.32■□□□□ 0.36
GTF2A2P52657 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.32■□□□□ 0.36
GTF2A2P52657 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.32■□□□□ 0.36
GTF2A2P52657 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.32■□□□□ 0.36
GTF2A2P52657 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
GTF2A2P52657 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.32■□□□□ 0.36
GTF2A2P52657 MIR3677-201ENST00000578964 60 ntBASIC17.32■□□□□ 0.36
GTF2A2P52657 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.32■□□□□ 0.36
GTF2A2P52657 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.32■□□□□ 0.36
GTF2A2P52657 AL157813.1-201ENST00000612996 587 ntBASIC17.32■□□□□ 0.36
GTF2A2P52657 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.32■□□□□ 0.36
GTF2A2P52657 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A2P52657 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
GTF2A2P52657 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A2P52657 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
GTF2A2P52657 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A2P52657 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A2P52657 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.32■□□□□ 0.36
GTF2A2P52657 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A2P52657 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
GTF2A2P52657 AC092127.1-201ENST00000567093 3455 ntBASIC17.31■□□□□ 0.36
GTF2A2P52657 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GTF2A2P52657 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GTF2A2P52657 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GTF2A2P52657 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2A2P52657 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2A2P52657 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.31■□□□□ 0.36
GTF2A2P52657 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2A2P52657 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2A2P52657 LINC01783-202ENST00000614408 828 ntBASIC17.31■□□□□ 0.36
GTF2A2P52657 BX284668.2-205ENST00000619677 828 ntBASIC17.31■□□□□ 0.36
GTF2A2P52657 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GTF2A2P52657 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 AL118508.1-201ENST00000613502 2345 ntBASIC17.31■□□□□ 0.36
GTF2A2P52657 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2A2P52657 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A2P52657 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GTF2A2P52657 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AL662844.4-201ENST00000606367 2838 ntBASIC17.3■□□□□ 0.36
GTF2A2P52657 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A2P52657 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GTF2A2P52657 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A2P52657 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GTF2A2P52657 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A2P52657 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A2P52657 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.3■□□□□ 0.36
GTF2A2P52657 AC005632.3-201ENST00000605544 308 ntBASIC17.3■□□□□ 0.36
GTF2A2P52657 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A2P52657 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A2P52657 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms