Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 AL021920.2-201ENST00000624828 1351 ntBASIC15□□□□□ -0.01
GTF2A1P52655 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
GTF2A1P52655 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15□□□□□ -0.01
GTF2A1P52655 TSPY22P-201ENST00000427496 604 ntBASIC15□□□□□ -0.01
GTF2A1P52655 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15□□□□□ -0.01
GTF2A1P52655 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15□□□□□ -0.01
GTF2A1P52655 AC011840.4-201ENST00000578471 627 ntBASIC15□□□□□ -0.01
GTF2A1P52655 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 AC013467.2-201ENST00000605472 835 ntBASIC15□□□□□ -0.01
GTF2A1P52655 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
GTF2A1P52655 AC005363.2-201ENST00000618631 242 ntBASIC15□□□□□ -0.01
GTF2A1P52655 AD001527.2-201ENST00000622994 785 ntBASIC15□□□□□ -0.01
GTF2A1P52655 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 HERC2P10-201ENST00000570209 2393 ntBASIC15□□□□□ -0.01
GTF2A1P52655 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC15□□□□□ -0.01
GTF2A1P52655 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
GTF2A1P52655 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
GTF2A1P52655 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GTF2A1P52655 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15□□□□□ -0.01
GTF2A1P52655 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
GTF2A1P52655 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
GTF2A1P52655 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GTF2A1P52655 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GTF2A1P52655 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC14.99□□□□□ -0.01
GTF2A1P52655 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.99□□□□□ -0.01
GTF2A1P52655 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.99□□□□□ -0.01
GTF2A1P52655 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.99□□□□□ -0.01
GTF2A1P52655 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.99□□□□□ -0.01
GTF2A1P52655 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 AC083849.1-201ENST00000615227 514 ntBASIC14.99□□□□□ -0.01
GTF2A1P52655 AC073592.5-201ENST00000624854 528 ntBASIC14.99□□□□□ -0.01
GTF2A1P52655 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
GTF2A1P52655 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
GTF2A1P52655 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
GTF2A1P52655 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GTF2A1P52655 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.98□□□□□ -0.01
GTF2A1P52655 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.98□□□□□ -0.01
GTF2A1P52655 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
GTF2A1P52655 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.98□□□□□ -0.01
GTF2A1P52655 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 AL512652.2-201ENST00000625156 1716 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms