Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
KRT6CP48668 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 MIR943-201ENST00000401286 94 ntBASIC14.84□□□□□ -0.03
KRT6CP48668 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6CP48668 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.84□□□□□ -0.03
KRT6CP48668 AC114501.2-201ENST00000439631 535 ntBASIC14.84□□□□□ -0.03
KRT6CP48668 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6CP48668 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6CP48668 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6CP48668 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
KRT6CP48668 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
KRT6CP48668 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6CP48668 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6CP48668 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.83□□□□□ -0.03
KRT6CP48668 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6CP48668 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.83□□□□□ -0.03
KRT6CP48668 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6CP48668 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6CP48668 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
KRT6CP48668 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6CP48668 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6CP48668 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
KRT6CP48668 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.83□□□□□ -0.03
KRT6CP48668 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
KRT6CP48668 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
KRT6CP48668 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
KRT6CP48668 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 SAMD11P1-201ENST00000571429 661 ntBASIC14.83□□□□□ -0.04
KRT6CP48668 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6CP48668 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
KRT6CP48668 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.83□□□□□ -0.04
KRT6CP48668 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms