Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SLC6A12P48065 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SLC6A12P48065 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SLC6A12P48065 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC6A12P48065 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 AC023908.3-201ENST00000564211 3047 ntBASIC14.66□□□□□ -0.06
SLC6A12P48065 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC6A12P48065 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC6A12P48065 AC055811.4-201ENST00000624039 1754 ntBASIC14.65□□□□□ -0.06
SLC6A12P48065 AC005912.2-201ENST00000619492 2400 ntBASIC14.65□□□□□ -0.06
SLC6A12P48065 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.65□□□□□ -0.06
SLC6A12P48065 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC6A12P48065 DGCR5-201ENST00000399539 862 ntBASIC14.65□□□□□ -0.06
SLC6A12P48065 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC6A12P48065 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC6A12P48065 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC6A12P48065 AC022137.2-201ENST00000503482 481 ntBASIC14.65□□□□□ -0.06
SLC6A12P48065 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC6A12P48065 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC6A12P48065 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC6A12P48065 RPSAP52-203ENST00000622976 1023 ntBASIC14.65□□□□□ -0.06
SLC6A12P48065 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.65□□□□□ -0.06
SLC6A12P48065 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC6A12P48065 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC6A12P48065 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SLC6A12P48065 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SLC6A12P48065 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 AC007191.1-201ENST00000623179 2995 ntBASIC14.65□□□□□ -0.06
SLC6A12P48065 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC6A12P48065 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC6A12P48065 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A12P48065 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC6A12P48065 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SLC6A12P48065 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A12P48065 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.64□□□□□ -0.07
SLC6A12P48065 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.64□□□□□ -0.07
SLC6A12P48065 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A12P48065 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A12P48065 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.64□□□□□ -0.07
SLC6A12P48065 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 AC093433.1-201ENST00000458048 571 ntBASIC14.64□□□□□ -0.07
SLC6A12P48065 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.64□□□□□ -0.07
SLC6A12P48065 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A12P48065 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A12P48065 AL033527.5-201ENST00000641382 801 ntBASIC14.64□□□□□ -0.07
SLC6A12P48065 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A12P48065 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A12P48065 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A12P48065 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A12P48065 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A12P48065 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A12P48065 AC113367.3-201ENST00000508316 1912 ntBASIC14.64□□□□□ -0.07
SLC6A12P48065 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SLC6A12P48065 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms