Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.97□□□□□ -0.01
CXCL12P48061 MIR4649-201ENST00000582839 64 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.97□□□□□ -0.01
CXCL12P48061 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 LINC01783-202ENST00000614408 828 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 BX284668.2-205ENST00000619677 828 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 PCDHA12-202ENST00000613593 2588 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 FER1L4-210ENST00000615531 5998 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.96□□□□□ -0.01
CXCL12P48061 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 AL138725.1-201ENST00000407347 1314 ntBASIC14.96□□□□□ -0.01
CXCL12P48061 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CXCL12P48061 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.96□□□□□ -0.01
CXCL12P48061 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CXCL12P48061 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.96□□□□□ -0.01
CXCL12P48061 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.96□□□□□ -0.01
CXCL12P48061 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.96□□□□□ -0.01
CXCL12P48061 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.96□□□□□ -0.01
CXCL12P48061 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.96□□□□□ -0.01
CXCL12P48061 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
CXCL12P48061 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.96□□□□□ -0.01
CXCL12P48061 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL12P48061 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CXCL12P48061 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL12P48061 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.96□□□□□ -0.02
CXCL12P48061 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CXCL12P48061 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCL12P48061 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CXCL12P48061 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCL12P48061 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CXCL12P48061 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CXCL12P48061 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCL12P48061 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 AC068587.6-202ENST00000641839 5619 ntBASIC14.95□□□□□ -0.02
CXCL12P48061 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL12P48061 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CXCL12P48061 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CXCL12P48061 AL512430.1-201ENST00000392575 860 ntBASIC14.95□□□□□ -0.02
CXCL12P48061 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.95□□□□□ -0.02
CXCL12P48061 AC097065.1-201ENST00000425737 517 ntBASIC14.95□□□□□ -0.02
CXCL12P48061 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCL12P48061 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCL12P48061 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.95□□□□□ -0.02
CXCL12P48061 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.95□□□□□ -0.02
CXCL12P48061 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms