Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC100756.1-201ENST00000562736 682 ntBASIC15.88■□□□□ 0.13
MMP13P45452 AC138749.3-201ENST00000567691 622 ntBASIC15.88■□□□□ 0.13
MMP13P45452 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
MMP13P45452 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 AC116165.1-201ENST00000611806 668 ntBASIC15.88■□□□□ 0.13
MMP13P45452 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.88■□□□□ 0.13
MMP13P45452 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
MMP13P45452 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 PKD1P5-201ENST00000532415 10291 ntBASIC15.87■□□□□ 0.13
MMP13P45452 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
MMP13P45452 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 MEP1AP4-201ENST00000423244 1087 ntBASIC15.87■□□□□ 0.13
MMP13P45452 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP13P45452 AC093004.1-201ENST00000508850 424 ntBASIC15.87■□□□□ 0.13
MMP13P45452 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP13P45452 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP13P45452 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP13P45452 RARRES2P5-201ENST00000564013 466 ntBASIC15.87■□□□□ 0.13
MMP13P45452 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.87■□□□□ 0.13
MMP13P45452 MIR4745-201ENST00000577608 62 ntBASIC15.87■□□□□ 0.13
MMP13P45452 RN7SL204P-201ENST00000582831 262 ntBASIC15.87■□□□□ 0.13
MMP13P45452 LINC02560-201ENST00000596379 459 ntBASIC15.87■□□□□ 0.13
MMP13P45452 AC004233.3-201ENST00000607794 1269 ntBASIC15.87■□□□□ 0.13
MMP13P45452 AL391069.4-201ENST00000609583 481 ntBASIC15.87■□□□□ 0.13
MMP13P45452 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP13P45452 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
MMP13P45452 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
MMP13P45452 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
MMP13P45452 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP13P45452 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.86■□□□□ 0.13
MMP13P45452 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
MMP13P45452 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
MMP13P45452 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MMP13P45452 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
MMP13P45452 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
MMP13P45452 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP13P45452 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.86■□□□□ 0.13
MMP13P45452 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP13P45452 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MMP13P45452 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP13P45452 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP13P45452 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms