Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CHRNA5P30532 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CHRNA5P30532 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNA5P30532 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHRNA5P30532 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CHRNA5P30532 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHRNA5P30532 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA5P30532 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
CHRNA5P30532 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA5P30532 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA5P30532 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNA5P30532 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA5P30532 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNA5P30532 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA5P30532 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.36■□□□□ 0.53
CHRNA5P30532 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 AP001184.1-201ENST00000637936 376 ntBASIC18.36■□□□□ 0.53
CHRNA5P30532 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA5P30532 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA5P30532 PCDHA14-201ENST00000506751 2298 ntBASIC18.35■□□□□ 0.53
CHRNA5P30532 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA5P30532 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA5P30532 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA5P30532 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRNA5P30532 AC003102.2-201ENST00000589195 1469 ntBASIC18.35■□□□□ 0.53
CHRNA5P30532 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.35■□□□□ 0.53
CHRNA5P30532 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA5P30532 FTH1P22-201ENST00000456305 520 ntBASIC18.35■□□□□ 0.53
CHRNA5P30532 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 CR383656.3-201ENST00000551315 183 ntBASIC18.35■□□□□ 0.53
CHRNA5P30532 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA5P30532 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CHRNA5P30532 AC009560.1-201ENST00000620208 434 ntBASIC18.35■□□□□ 0.53
CHRNA5P30532 AC133540.1-201ENST00000620845 1019 ntBASIC18.35■□□□□ 0.53
CHRNA5P30532 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRNA5P30532 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHRNA5P30532 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA5P30532 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA5P30532 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA5P30532 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA5P30532 AC018629.1-201ENST00000623381 1736 ntBASIC18.35■□□□□ 0.53
CHRNA5P30532 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA5P30532 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHRNA5P30532 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 TSPY25P-201ENST00000429463 745 ntBASIC18.34■□□□□ 0.53
CHRNA5P30532 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.34■□□□□ 0.53
CHRNA5P30532 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA5P30532 ORAOV1P1-201ENST00000503108 395 ntBASIC18.34■□□□□ 0.53
CHRNA5P30532 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.34■□□□□ 0.53
CHRNA5P30532 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA5P30532 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHRNA5P30532 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA5P30532 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms