Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 COX20P2-201ENST00000452636 358 ntBASIC12.81□□□□□ -0.36
LMO1P25800 AC093004.1-201ENST00000508850 424 ntBASIC12.81□□□□□ -0.36
LMO1P25800 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO1P25800 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO1P25800 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO1P25800 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO1P25800 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.81□□□□□ -0.36
LMO1P25800 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO1P25800 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LMO1P25800 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO1P25800 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO1P25800 BRI3BPP1-201ENST00000594224 787 ntBASIC12.81□□□□□ -0.36
LMO1P25800 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO1P25800 AL096865.1-201ENST00000606796 927 ntBASIC12.81□□□□□ -0.36
LMO1P25800 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LMO1P25800 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO1P25800 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO1P25800 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO1P25800 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 MBLAC2-202ENST00000514906 1936 ntBASIC12.8□□□□□ -0.36
LMO1P25800 NORAD-201ENST00000565493 5339 ntBASIC12.8□□□□□ -0.36
LMO1P25800 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO1P25800 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO1P25800 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO1P25800 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 AL049840.4-201ENST00000602422 811 ntBASIC12.8□□□□□ -0.36
LMO1P25800 AC107373.2-201ENST00000607735 490 ntBASIC12.8□□□□□ -0.36
LMO1P25800 AC009118.2-201ENST00000613275 655 ntBASIC12.8□□□□□ -0.36
LMO1P25800 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LMO1P25800 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 AC007686.3-201ENST00000619017 3487 ntBASIC12.8□□□□□ -0.36
LMO1P25800 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO1P25800 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO1P25800 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms