Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABRR1P24046 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GABRR1P24046 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GABRR1P24046 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GABRR1P24046 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
GABRR1P24046 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.19□□□□□ -0.3
GABRR1P24046 AL080243.2-201ENST00000418783 582 ntBASIC13.19□□□□□ -0.3
GABRR1P24046 FAM8A3P-201ENST00000427218 844 ntBASIC13.19□□□□□ -0.3
GABRR1P24046 HIST3H2BA-201ENST00000436555 524 ntBASIC13.19□□□□□ -0.3
GABRR1P24046 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.19□□□□□ -0.3
GABRR1P24046 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.19□□□□□ -0.3
GABRR1P24046 KLF2P3-201ENST00000451977 1087 ntBASIC13.19□□□□□ -0.3
GABRR1P24046 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.19□□□□□ -0.3
GABRR1P24046 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.19□□□□□ -0.3
GABRR1P24046 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.19□□□□□ -0.3
GABRR1P24046 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.19□□□□□ -0.3
GABRR1P24046 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.19□□□□□ -0.3
GABRR1P24046 AC093028.1-201ENST00000622998 982 ntBASIC13.19□□□□□ -0.3
GABRR1P24046 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.19□□□□□ -0.3
GABRR1P24046 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GABRR1P24046 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GABRR1P24046 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 AL137784.3-201ENST00000623858 2288 ntBASIC13.19□□□□□ -0.3
GABRR1P24046 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GABRR1P24046 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GABRR1P24046 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GABRR1P24046 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 AC087386.2-201ENST00000623212 4637 ntBASIC13.18□□□□□ -0.3
GABRR1P24046 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GABRR1P24046 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GABRR1P24046 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GABRR1P24046 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 RPL37AP1-201ENST00000412502 279 ntBASIC13.18□□□□□ -0.3
GABRR1P24046 AC107890.1-201ENST00000422478 521 ntBASIC13.18□□□□□ -0.3
GABRR1P24046 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.18□□□□□ -0.3
GABRR1P24046 AC067863.1-201ENST00000494933 530 ntBASIC13.18□□□□□ -0.3
GABRR1P24046 AC069120.2-201ENST00000524091 540 ntBASIC13.18□□□□□ -0.3
GABRR1P24046 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.18□□□□□ -0.3
GABRR1P24046 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.18□□□□□ -0.3
GABRR1P24046 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.18□□□□□ -0.3
GABRR1P24046 SPDYE12P-201ENST00000618416 771 ntBASIC13.18□□□□□ -0.3
GABRR1P24046 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.18□□□□□ -0.3
GABRR1P24046 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 AL033527.5-202ENST00000641632 1098 ntBASIC13.18□□□□□ -0.3
GABRR1P24046 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.18□□□□□ -0.3
GABRR1P24046 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GABRR1P24046 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABRR1P24046 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.18□□□□□ -0.3
GABRR1P24046 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms