Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.93□□□□□ -0.18
CD53P19397 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 SLC7A15P-201ENST00000424028 1363 ntBASIC13.93□□□□□ -0.18
CD53P19397 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 AC140479.7-201ENST00000636301 2332 ntBASIC13.92□□□□□ -0.18
CD53P19397 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 AC114501.2-201ENST00000439631 535 ntBASIC13.92□□□□□ -0.18
CD53P19397 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 SPDYE18-201ENST00000510091 1050 ntBASIC13.92□□□□□ -0.18
CD53P19397 AC055876.2-201ENST00000531834 546 ntBASIC13.92□□□□□ -0.18
CD53P19397 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.92□□□□□ -0.18
CD53P19397 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.92□□□□□ -0.18
CD53P19397 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.92□□□□□ -0.18
CD53P19397 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 AC007614.4-201ENST00000564048 1827 ntBASIC13.92□□□□□ -0.18
CD53P19397 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.92□□□□□ -0.18
CD53P19397 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.92□□□□□ -0.18
CD53P19397 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD53P19397 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CD53P19397 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CD53P19397 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.91□□□□□ -0.18
CD53P19397 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.91□□□□□ -0.18
CD53P19397 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD53P19397 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.91□□□□□ -0.18
CD53P19397 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 SERBP1P3-201ENST00000459980 809 ntBASIC13.91□□□□□ -0.18
CD53P19397 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.91□□□□□ -0.18
CD53P19397 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.91□□□□□ -0.18
CD53P19397 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.91□□□□□ -0.18
CD53P19397 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.91□□□□□ -0.18
CD53P19397 AC061975.2-201ENST00000581722 295 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms